CDS

Accession Number TCMCG007C15616
gbkey CDS
Protein Id XP_033140545.1
Location complement(join(27965159..27965259,27965355..27965403,27965505..27965649,27965745..27965803,27965881..27965916,27990115..27990259,27990366..27990424,27990509..27990629,27990721..27990833))
Gene LOC103854608
GeneID 103854608
Organism Brassica rapa

Protein

Length 275aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033284654.1
Definition uncharacterized protein LOC103854608 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category J
Description rRNA binding
KEGG_TC 1.A.12.2.1
KEGG_Module M00177        [VIEW IN KEGG]
M00179        [VIEW IN KEGG]
M00359        [VIEW IN KEGG]
M00360        [VIEW IN KEGG]
KEGG_Reaction R01108        [VIEW IN KEGG]
R03522        [VIEW IN KEGG]
R03659        [VIEW IN KEGG]
R03665        [VIEW IN KEGG]
R03875        [VIEW IN KEGG]
R03938        [VIEW IN KEGG]
R04773        [VIEW IN KEGG]
R04866        [VIEW IN KEGG]
R04867        [VIEW IN KEGG]
KEGG_rclass RC00003        [VIEW IN KEGG]
RC00011        [VIEW IN KEGG]
RC00055        [VIEW IN KEGG]
RC00060        [VIEW IN KEGG]
RC00092        [VIEW IN KEGG]
RC00181        [VIEW IN KEGG]
RC00496        [VIEW IN KEGG]
RC00523        [VIEW IN KEGG]
RC00948        [VIEW IN KEGG]
BRITE br01610        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01007        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
ko03011        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko03110        [VIEW IN KEGG]
ko04031        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K01873        [VIEW IN KEGG]
ko:K01874        [VIEW IN KEGG]
ko:K02922        [VIEW IN KEGG]
ko:K07555        [VIEW IN KEGG]
ko:K07891        [VIEW IN KEGG]
ko:K09557        [VIEW IN KEGG]
ko:K11423        [VIEW IN KEGG]
ko:K21888        [VIEW IN KEGG]
EC 1.8.5.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
2.1.1.43        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
2.5.1.18        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
6.1.1.10        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
6.1.1.9        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00053        [VIEW IN KEGG]
ko00310        [VIEW IN KEGG]
ko00450        [VIEW IN KEGG]
ko00480        [VIEW IN KEGG]
ko00970        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03010        [VIEW IN KEGG]
ko04144        [VIEW IN KEGG]
map00053        [VIEW IN KEGG]
map00310        [VIEW IN KEGG]
map00450        [VIEW IN KEGG]
map00480        [VIEW IN KEGG]
map00970        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03010        [VIEW IN KEGG]
map04144        [VIEW IN KEGG]
GOs GO:0000184        [VIEW IN EMBL-EBI]
GO:0000448        [VIEW IN EMBL-EBI]
GO:0000460        [VIEW IN EMBL-EBI]
GO:0000463        [VIEW IN EMBL-EBI]
GO:0000466        [VIEW IN EMBL-EBI]
GO:0000469        [VIEW IN EMBL-EBI]
GO:0000470        [VIEW IN EMBL-EBI]
GO:0000478        [VIEW IN EMBL-EBI]
GO:0000479        [VIEW IN EMBL-EBI]
GO:0000956        [VIEW IN EMBL-EBI]
GO:0002181        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003735        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004364        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005759        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005840        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006413        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006575        [VIEW IN EMBL-EBI]
GO:0006605        [VIEW IN EMBL-EBI]
GO:0006612        [VIEW IN EMBL-EBI]
GO:0006613        [VIEW IN EMBL-EBI]
GO:0006614        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006749        [VIEW IN EMBL-EBI]
GO:0006790        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007005        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008270        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009636        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009735        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009941        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0010731        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015036        [VIEW IN EMBL-EBI]
GO:0015037        [VIEW IN EMBL-EBI]
GO:0015038        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015934        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016209        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016667        [VIEW IN EMBL-EBI]
GO:0016672        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016765        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019838        [VIEW IN EMBL-EBI]
GO:0019843        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022625        [VIEW IN EMBL-EBI]
GO:0022626        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0030687        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0033615        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042273        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043461        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044391        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044429        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044445        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045047        [VIEW IN EMBL-EBI]
GO:0045174        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051082        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051186        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070071        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070972        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:0072599        [VIEW IN EMBL-EBI]
GO:0072657        [VIEW IN EMBL-EBI]
GO:0090150        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090502        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097237        [VIEW IN EMBL-EBI]
GO:0098754        [VIEW IN EMBL-EBI]
GO:0098869        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1990748        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGAAAGACTCGGGGCATGGGACCAGGGCGTTCTTCACGCAAGAGGAGACCACCTTACCGTTCTCTATTCCGACCTCTCTCAGTCGGAGAAAGAGGCTTACAACGAAAGAGATTGGCCGCACTGAGTCGCATGAAGAATACACTCGGCTCTAAAGTCTCGTTGCCTAACCAATCAGATAAGAGCCTGAAGAGAACTGATCAGACCACTCTTGTCTCCGGAACTGATATTCAGGGAAAGTTGTCGTCTGATGTTGTTGCTAGCACCTCGAAGCCTCAGACGTCATCATCAAGTTTGGTCGGGATGAAGAAAACACTAGGTTCTCAAGTCTCGTTGCTACGTTGTTCTACCTGTATGCAAATAATCCAGTCCGATAAGAGTCTAAAGGGATCTTCTGATCAGGATCAGACCACTCTTGTCTCCCAAATTGATATACAGGATCAGACCACTCTTGTCTCAGGAATTGATATTCAGGAAAAGTCGTCGTCTGATGTTGTTGCTAGCACCTCGAAGCCTCAGACGCCATCACCGAGTTTGGTCGGGATGAAGAAAACACTAGGTTCTCAAGTCTCGTTGCTACGTTGTTCTACCTGTATGCAAATAATCCAGTCCGATAAGAGTCTAAAGGGATCTTCTGATCAGGATCAGACCACTCTTGTCTCCCAAATTGATATACAGGAAAAGTTGTCGTCTGATATCGTTAGTAGCACCTCCAAGCCTCATCAAGGTAAGCATCTCCGATCAAGTTCAAAGATGCACAAGCCCAAAGCTTTTCTAAAGAAGAAGAAGAAGAAGAAGAGCTCACGCAAAGCTGTATCCACCACCTAA
Protein:  
MGKTRGMGPGRSSRKRRPPYRSLFRPLSVGERGLQRKRLAALSRMKNTLGSKVSLPNQSDKSLKRTDQTTLVSGTDIQGKLSSDVVASTSKPQTSSSSLVGMKKTLGSQVSLLRCSTCMQIIQSDKSLKGSSDQDQTTLVSQIDIQDQTTLVSGIDIQEKSSSDVVASTSKPQTPSPSLVGMKKTLGSQVSLLRCSTCMQIIQSDKSLKGSSDQDQTTLVSQIDIQEKLSSDIVSSTSKPHQGKHLRSSSKMHKPKAFLKKKKKKKSSRKAVSTT